2014

Xinlu Guo, Jun Wang, Jian Zhang & Wei Wang
Conformational phase diagram for proteins absorbed on ultra-small nanoparticles studied by a structure-based coarse-grained model
Molecular Simulation, DOI:10.1080/08927022.2014.964234


Yunqiang Bian, Jian Zhang, Jun Wang & Wei Wang
On the accuracy of metadynamics and its variations in a protein folding process
Molecular Simulation, DOI: 10.1080/08927022.2014.931680

 

QingHe Zhang, Xiaojun Tian, Feng Liu & Wei Wang

A switch-like dynamic mechanism for the initiation of replicative senescence

FEBS Lett. 588, 4369-4374 (2014)
 

Chunmei Lv, Xiang Gao, Wenfei Li, Bo Xue, Meng Qin, Leslie D. Burtnick, Hao Zhou, Yi Cao, Robert C. Robinson & Wei Wang
Single-molecule force spectroscopy reveals force-enhanced binding of calcium ions by ?gelsolin
Nature Communications 5, 4623 (2014)

 

Wenfei Li, Wei Wang, and Shoji Takada

Energy Landscape Views for Interplays among Folding, Binding, and Allostery of Calmodulin Domains

Proceedings of the National Academy of Sciences of the United States of America 111, no. 29 (2014): 10550-10555

Bian, Yunqiang, Cheng Tan, Jun Wang, Yuebiao Sheng, Jian Zhang, and Wei Wang

Atomistic Picture for the Folding Pathway of a Hybrid-1 Type Human Telomeric DNA G-Quadruplex

Plos Computational Biology 10, no. 4 (2014)

Xue, Bin, Ying Li, Fan Yang, Chunfeng Zhang, Meng Qin, Yi Cao, and Wei Wang

An Integrated Artificial Photosynthesis System Based on Peptide Nanotubes

Nanoscale 6, no. 14 (2014): 7832-7837

Zhang, Xiao-Peng, Feng Liu, and Wei Wang

Interplay between Mdm2 and Hipk2 in the DNA Damage Response

?Journal of the Royal Society Interface 11, no. 96 (2014)

Zhou, Chun-Hong, Xiao-Peng Zhang, Feng Liu, and Wei Wang

Involvement of Mir-605 and Mir-34a in the DNA Damage Response Promotes Apoptosis Induction

Biophysical Journal 106, no. 8 (2014): 1792-1800

Wang, Yaolai, Feng Liu, Jun Li, and Wei Wang

Reconciling the Concurrent Fast and Slow Cycling of Proteins on Gene Promoters

Journal of the Royal Society Interface 11, no. 96 (2014)

Li, Ying, Meng Qin, Yi Cao, and Wei Wang

Designing the Mechanical Properties of Peptide-Based Supramolecular Hydrogels for Biomedical Applications

Science China-Physics Mechanics & Astronomy 57, no. 5 (2014): 849-858

Li, Yiran, Meng Qin, Ying Li, Yi Cao, and Wei Wang

Single Molecule Evidence for the Adaptive Binding of Dopa to Different Wet Surfaces

Langmuir 30, no. 15 (2014): 4358-4366

Liang, Junyi, Lele Guo, Yin Ding, Lei Xia, Yan Shen, Meng Qin, Qiang Xu, Yi Cao, and Wei Wang

Genetically Encoded Red Fluorescent Copper(I) Sensors for Cellular Copper(I) Imaging

Biochem Biophys Res Commun 443, no. 3 (2014): 894-898
 

 

2013

Cao Yi

?A Single-Molecule View on the Disassembly of Tobacco Mosaic Virus

?Biophysical Journal 105 (2013): 2615-2616

Liang, Junyi, Yang Yang, Puguang Yin, Yin Ding, Yan Shen, Meng Qin, Jun Wang, Qiang Xu, Yi Cao, and Wei Wang

A Yellow Fluorescent Protein with Reduced Chloride Sensitivity Engineered by Loop-Insertion

Chembiochem 14, no. 12 (2013): 1423-1426

Liu, Chao, Wenfei Li, and Wei Wang

Correlation of Reorientational Jumps of Water Molecules in Bulk Water

Physical Review E 87, no. 5 (2013)

Lv, Chunmei, Dawei Zou, Meng Qin, Wei Meng, Yi Cao, and Wei Wang

Hydrodynamic Force Depends Not Only on the Viscosity of Solution but Also on the Molecular Weights of Viscogens

Langmuir 29, no. 34 (2013): 10624-10629

Meng, Wei, Hai Pan, Meng Qin, Yi Cao, and Wei Wang

Osmolyte Effects on the Unfolding Pathway of Beta-Lactoglobulin

Chinese Physics Letters 30, no. 10 (2013)

Tan, Cheng, Wenfei Li, and Wei Wang

Localized Frustration and Binding-Induced Conformational Change in Recognition of 5s Rna by Tfiiia Zinc Finger

Journal of Physical Chemistry B 117, no. 50 (2013): 15917-15925

Tan, Cheng, Wenfei Li, and Wei Wang

Specific Binding of a Short Mirna Sequence by Zinc Knuckles of Lin28: A Molecular Dynamics Simulation Study

Journal of Theoretical & Computational Chemistry 12, no. 8 (2013)

Xie, Jinbing, Yi Cao, Mao Xia, Xiang Gao, Meng Qin, Jiwu Wei, and Wei Wang

One-Step Photo Synthesis of Protein-Drug Nanoassemblies for Drug Delivery

Advanced Healthcare Materials 2, no. 6 (2013): 795-799

Xie, Jinbing, Ying Li, Yi Cao, Chun Xu, Mao Xia, Meng Qin, Jiwu Wei, and Wei Wang

Photo Synthesis of Protein-Based Drug-Delivery Nanoparticles for Active Tumor Targeting

Biomaterials Science 1, no. 12 (2013): 1216-1222

Ding, Baiyong, Ying Li, Meng Qin, Yin Ding, Yi Cao, and Wei Wang

Two Approaches for the Engineering of Homogeneous Small-Molecule Hydrogels

Soft Matter 9, no. 18 (2013): 4672-4680

Ding, Yin, Ying Li, Meng Qin, Yi Cao, and Wei Wang

Photo-Cross-Linking Approach to Engineering Small Tyrosine-Containing Peptide Hydrogels with Enhanced Mechanical Stability

Langmuir 29, no. 43 (2013): 13299-13306

Li, Ying, Yin Ding, Meng Qin, Yi Cao, and Wei Wang

An Enzyme-Assisted Nanoparticle Crosslinking Approach to Enhance the Mechanical Strength of Peptide-Based Supramolecular Hydrogels

Chemical Communications 49, no. 77 (2013): 8653-8655
 

 

2012

Hai Pan, Meng Qin, Wei Meng, Yi Cao, and Wei Wang
How Do Proteins Unfold upon Adsorption on Nanoparticle Surfaces?
Langmuir, DOI: 10.1021/la302258k, (2012)


Xiaotian Han, Meng Qin, Hai Pan, Yi Cao, and Wei Wang
A versatile “multiple fishhooks” approach for the study of ligand–receptor interactions using single-molecule atomic force microscopy
Langmuir, 28 (2012)10020

 

Wenfei Li, Tsuyoshi Terakawa, Wei Wang and Shoji Takada
Energy landscape and multiroute folding of topologically complex proteins adenylate kinase and 2out-knot
Proc. Natl. Acad. Sci. U. S. A. 109 (2012) 17789

Wenhui Xi, Wenfei Li, and Wei Wang
Template Induced Conformational Change of Amyloid-β Monomer
J. Phys. Chem. B, 116 (2012) 7398–7405

Wenhui Xi, Wenfei Li, and Wei Wang
Modulation of amyloid-β conformation by charge state of N-terminal disordered region
CHIN. PHYS. LETT. 29 (2012)088702

Junyi Liang, Meng Qin, Rui Xu, Xiang Gao, Yan Shen, Qiang Xu, Yi Cao and Wei Wang
A genetically encoded copper(I) sensor based on engineered structural distortion of EGFPw
Chem. Commun. 48 (2012) 3890

Chunmei Lv, Cheng Tan, Meng Qin, Dawei Zou, Yi Cao, and Wei Wang
Low Folding Cooperativity of Hp35 Revealed by Single-Molecule Force Spectroscopy and Molecular Dynamics Simulation
Biophys. J. 102 (2012) 1944

Xiang Gao, Meng Qin, Puguang Yin, Junyi Liang, Jun Wang, Yi Cao, and Wei Wang
Single-Molecule Experiments Reveal the Flexibility of a Per-ARNT-Sim Domain and the Kinetic Partitioning in the Unfolding Pathway under Force
Biophys. J. 102 (2012) 2149

Yaolai Wang, Feng Liu and Wei Wang
Dynamic Mechanism for the Transcription Apparatus Orchestrating Reliable Responses to Activators
Sci. Rep. 2 (2012) srep00422

Xiao-Jun Tian, Feng Liu, Xiao-Peng Zhang, Jun Li, Wei Wang
A Two-Step Mechanism for Cell Fate Decision by Coordination of Nuclear and Mitochondrial p53 Activities
PLoS ONE 7 (2012) e38164.

Xiao-Peng Zhang, Feng Liu, and Wei Wang
Regulation of the DNA Damage Response by p53 Cofactors
Biophys. J. 102 (2012) 2251

Jian Zhang, Yunqiang Bian, Hui Lin and Wei Wang
RNA fragment modeling with a nucleobase discrete-state model
Phys.Rev.E 85 (2012) 021909

 

 

2011

Xinlu Guo, Jian Zhang, Le Chang, Jun Wang, and Wei Wang
Effectiveness of Φ-value analysis in the binding process of Arc repressor dimer
PHYSICAL REVIEW E, 84, 011909 (2011)


Pan Hai, Xie Jin-Bing, Cao Yi, Qin Meng, and Wang Wei
Effects of Labeling Thiophilic FRET Dyes on the Stability and Dimerization Process of β-Lactoglobulin
CHIN. PHYS. LETT. 28 (2011) 118702

Wenfei Li, Meng Qin, Zuoxiu Tie, and Wei Wang
Effects of solvents on the intrinsic propensity of peptide backbone conformations
Phys.Rev.E 84(2011)041933

Jinbing Xie, Meng Qin, Yi Cao, and Wei Wang
Mechanistic insight of photo-induced aggregation of chicken egg white lysozyme: The interplay between hydrophobic interactions and formation of intermolecular disulfide bonds
Proteins 79(2011)2505–2516.

Dawei Zou, Yi Cao, Meng Qin, Weimin Dai and Wei Wang
Formation of alpha-helix-based twisted ribbon-like fibrils from ionic-complementary peptidesw
Chem. Commun. 47(2011)7413–7415

 

Wenfei Li,Peter G. Wolynes,and Shoji Takada
Frustration, specific sequence dependence, and nonlinearity in large-amplitude fluctuations of allosteric proteins
Proc. Natl. Acad. Sci. U. S. A. 108(2011) 3504–3509

Yujie Zhang, Jian Zhang,and Wei Wang
Atomistic Analysis of Pseudoknotted RNA Unfolding
J. Am. Chem. Soc. 133(2011)6882–6885

TIE Zuo-Xiu, QIN Meng, ZOU Da-Wei, CAO Yi, WANG Wei
Photo-Crosslinking Induced Geometric Restriction Controls the Self-Assembly of Diphenylalanine Based Peptides
CHIN. PHYS. LETT. ?28(2011) 028702

Xiao-Peng Zhang, Feng Liu, and Wei Wang
Two-phase dynamics of p53 in the DNA damage response
Proc. Natl. Acad. Sci. U. S. A. (2011)8990-8995

Dawei Zou, Yi Cao, Meng Qin, Weimin Dai and Wei Wang
Formation of a-helix-based twisted ribbon-like fibrils from ionic-complementary peptidesw
Chem. Commun. (2011) DOI: 10.1039/c1cc12001h

 

 

2010

Tian Pu, Xiao-Peng Zhang, Feng Liu,and Wei Wang
Coordination of the Nuclear and Cytoplasmic Activities of p53 in Response to DNA Damage
Biophys. J. 99 (2010)1696–1705


Le Chang, Jun Wang, and Wei Wang
Composition-based effective chain length for prediction of protein folding rates
Physical Review E 82 (2010)051930


Yuebiao Sheng,Wei Wang, P. Chen
Adsorption of an Ionic Complementary Peptide on the Hydrophobic Graphite Surface
Journal of Physical Chemistry C 114 (2010) 454-459.


Yuebiao Sheng,Wei Wang, P. Chen
Interaction of an ionic complementary peptide with a hydrophobic graphite surface
Protein Science 19 (2010) 1639-1648.


Li Sun, Jun Wang, Wei Wang
Dissection of the Zipping-and-Assembly Mechanism for Folding of Model Proteins
CHIN. PHYS. LETT. 27(2010) 038702


Zhiqiang Yan, Jun Wang,Jian Zhang, Meng Qin, and Wei Wang
Structural selection of ionic-complementary peptides with electrostatic interactions
Physical Review E 82 (2010)031917


Zhiqiang Yan, Z. Q., J. Wang, et al. (2010).
Nucleation process in the folding of a domain-swapped dimer
Physical Review E 81(2010)021910


Jian Zhang, Yu-Jie Zhang , Wei Wang
An RNA Base Discrete State Model toward Tertiary Structure Prediction
CHIN. PHYS. LETT. 27 (2010)118702


Xiao-peng Zhang, Feng Liu, Wei Wang
Coordination between Cell Cycle Progression and Cell Fate Decision by the p53 and E2F1 Pathways in Response to DNA Damage
Journal of Biological Chemistry 285 (2010)31571-31580.


Dawei Zou,Zuoxiu Tie,Chunmei Lu,Meng Qin,Xiaomei Lu,Mu Wang,Wei Wang, P. Chen
Effects of Hydrophobicity and Anions on Self-Assembly of the Peptide EMK16-II
Biopolymers 93(2010)318-329


Guanghong Zuo, Wenfei Li,Jian Zhang,Jin Wang, Wei Wang
Folding of a Small RNA Hairpin Based on Simulation with Replica Exchange Molecular Dynamics
Journal of Physical Chemistry B 114 (2010)5835-5839


Guanghong Zuo, Jun Wang, Meng Qin, Bin Xue, Wei Wang
Effect of solvation-related interaction on the low-temperature dynamics of proteins
Physical Review E 81(2010)031917

 

2009

 

JIAN ZHANG, JOSEPH DUNDAS, MING LIN, RONG CHEN, WEI WANG, and JIE LIANG
Prediction of geometrically feasible three-dimensional structures of pseudoknotted RNA through free energy estimation
RNA, 15, 2248–2263(2009)

 

Wei Wang, Wei-Xin Xu, Yaakov Levy, E. Trizac, and P. G. Wolynes
Confinement effects on the kinetics and thermodynamics of protein dimerization
Proc. Natl. Acad. Sci. U. S. A. 106(2009)5517–5522

 

Xiaopeng Zhang, Feng Liu, Zhang Cheng and Wei Wang
Cell fate decision mediated by p53 pulses
Proc. Natl. Acad. Sci. U. S. A. 106(2009)12245-12250

 

Jie Li, Feng Liu, Ding Xu, Wei Wang
Signal propagation through feedforward neuronal networks with different operational modes
EPL 85 (2009) 38006

 

Xiaojun Tian, Xiaopeng Zhang, Feng Liu and Wei Wang
Interlinking positive and negative feedback loops creates a tunable motif in gene regulatory networks.
Phys.Rev.E (2009) 80,011926:1-8.


Lei Wu, Wenfei Li, Feng Liu, Jian Zhang, Jun Wang, Wei Wang

Understanding protein folding cooperativity based on topological consideration
JOURNAL OF CHEMICAL PHYSICS 131 (2009) 065105

 

Zhang Cheng, Feng Liu, Xiao-Peng Zhang, and Wei Wang
Reversible Phosphorylation Subserves Robust Circadian Rhythms by Creating a Switch in Inactivating the Positive Element
Biophysical Journal 97 (2009) 2867–2875

 

Jie Li, Wan-Qing Yu, Ding Xu,Feng Liu, Wei Wang
Mechanism for propagation of rate signals through a 10-layer feedforward neuronal network
CHINESE PHYSICS B 18 (2009) 5560-5565


Dawei Zou, Zuoxiu Tie, Meng Qin M, Wei Wang
Effect of Phosphate on the Self-Assembly of Peptide EMK16-II
CHINESE PHYSICS LETTERS 26 (2009) 088103


Jian Zhang, Wenfei Li, Jun Wang, Meng Qin, Lei Wu, Zhiqiang Yan,Weixin Xu, Guanghong Zuo, Wei Wang
Protein Folding Simulations: From Coarse-Grained Model to All-Atom Model
IUBMB LIFE 61 (2009) 627-643

 

 

 

2008

 

Wenfei Li, Jian Zhang, Jun Wang and Wei Wang
Metal-Coupled Folding of Cys2His2 Zinc-Finger
J. Am. Chem. Soc. 130 (2008) 892-900

 

Jian Zhang, Wenfei Li, Jun Wang, Meng Qin and Wei Wang
All-atom replica exchange molecular simulation of protein BBL
Proteins 72 (2008) 1038-1047


Lei Wu, Jian Zhang, Meng Qin, Feng Liu and Wei Wang
Folding of proteins with an all-atom Gō-model
J. Chem. Phys. 128 (2008) 235103

 

Lingzhi Wu, Baoliang Ma, Yuebiao Sheng and Wei Wang
Equilibrium and kinetic analysis on the folding of hen egg lysozyme in the aqueous-glycerol solution
J. Mol. Struct. 891 (2008) 167-172

 

Jie Li, Jun Wang and Wei Wang
Identifying folding nucleus based on residue contact networks of proteins
Proteins 71 (2008) 1899-1907


Zhiqiang Yan, Jun Wang and Wei Wang
Folding and dimerization of the ionic peptide EAK16-IV
Proteins 72 (2008) 15-162


Jian Zhang, Ming Lin, Rong Chen, Wei Wang and Jie Liang
Discrete state model and accurate estimation of loop entropy of RNA secondary structures
J. Chem. Phys. 128 (2008) 125107

 

Lingzhi Wu, Yuebiao Sheng, Jinbing Xie and Wei Wang
Photoexcitation of tryptophan groups induced reduction of disulfide bonds in hen egg white lysozyme
J. Mol. Struct. 882 (2008) 101-106

 

Lingzhi Wu, Baoliang Ma, Dawei Zou and Wei Wang
Influence of metal ions on folding pathway and conformational stability of bovine serum albumin
J. Mol. Struct. 877 (2008) 44-49

 

Yu Su, Wenfei Li, Jian Zhang and Wei Wang
An improved method of potential of mean force for protein-protein interactions
Chin. Sci. Bull. 53 (2008) 1145-1151

 

Feng Liu and Xiaojing Wang
A Common Cortical Circuit Mechanism for Perceptual Categorical Discrimination and Veridical Judgment
PLoS Computational Biology 4 (2008) e1000253

 

Zhang Cheng, Feng Liu, Xiaopeng Zhang and Wei Wang
Robustness analysis of cellular memory in an autoactivating positive feedback system
FEBS Letters 582 (2008) 3776–3782

 

 

2007

 

Wenfei Li, Jiang Zhang and Wei Wang
Understanding the Folding and Stability of a Zinc Finger Based Full Sequence Design Protein with Replica Exchange Molecular Dynamics Simulations
Proteins 67 (2007) 338-349


Lei Wu, Jian Zhang, Jun Wang, Wenfei Li and Wei Wang
Folding behavior of ribosomal protein S6 studied by modified modified G(o)over-bar-like model
Phys. Rev. E 75 (2007) 031914

 

Wenfei Li, Jian Zhang, Yu Su, Jun Wang, Meng Qin and Wei Wang
Effects of Zinc Binding on the Conformational Distribution of the Amyloid-a Peptide Based on Molecular Dynamics Simulations
J. Phys. Chem. B 111 (2007) 13814-13821


Jing Li and Wei Wang
Grouping of amino acids and recognition of protein structurally conserved regions by reduced alphabets of amino acids
Sci China Ser C - Life Sci. 50 (2007) 3, 392-402

 

Xiaopeng Zhang, Zhang Cheng, Feng Liu and Wei Wang
Linking fast and slow positive feedback loops creates an optimal bistable switch in cell signaling
Phys. Rev. E 76 (2007) 031924

 

Y.Chen, Jun Wang and Wang W
The preferences of orientations between the pairs of amino acids
Chin. Phys. 16 (2007) 868-875

 

 

2006

 

Yuebiao Sheng and Wei Wang
Comparative all-atomic study of unfolding pathways for proteins CI2 and barnase
Phys. Rev. E 73 (2006) 021915

 

Meng Qin, Jian Zhang and Wei Wang
Effects of Disulfide Bonds on Folding Behavior and Mechanism of beta- Sheet Protein Tendamistat
Biophys. J. 90 (2006) 272-286

 

Guanghong Zuo, Jun Wang and Wei Wang
Folding with downhill behavior and low cooperativity of proteins
Proteins 63 (2006) 165-173


Jian Zhang, Meng Qin and Wei Wang
Folding mechanism of beta-hairpins studied by replica exchange molecular simulations
Proteins 62 (2006) 672-685


Sentao Wang, Wei Wang and Feng Liu
Propagation of firing rate in a feed-forward neuronal network
Phys. Rev. Lett. 96 (2006) 018103


Baoliang Ma, Zuoxiu Tie, Dawei Zou, Jing Li and Wei Wang
Urea- and thermal- induced unfolding of boving serum albumin
Mod. Phys. Lett. B 20 (2006) 1909-1916


Xinsheng Liu, Jing Li, Wanlin Guo and Wei Wang
A new method for quantifying residue conservation and its applications to the protein folding nucleus
Biochem. Biophys. Res. Commun. 351 (2006) 1031-1036


李 菁, 王 炜
氨基酸残基归类及用简化后的字符识别蛋白质结构保守区域
中国科学 C 辑 生命科学 36 (6) 552-562


Jing Li, Fengbo Li and Wei Wang
Simplification of protein sequence and alignment-free sequence analysis
Prog. Biochem. Biophy. 33 (2006) 1215-1222

 

Jing Li and Wei Wang
Detailed assessment of homology detection using different substitution matrices
Chin. Sci. Bull. 51 (2006) 1538

 

H. Yang, M. Pritzker, S.Y. Fung, Y. Sheng, W. Wang and P. Chen
Anion Effect on the Nanostructure of a Metal Ion Binding Self-Assembling Peptide
Langmuir 22 (2006) 8553-8562

 

Y Chen, Jun Wang, Bing Xue, Wei Wang
The orientational preferences of backbones of proteins
Chin. Sci. Bull. 51 (2006) 2559-2565

 

 

2005

 

Weixin Xu, Jun Wang and Wei Wang
Folding behavior of Chaperonin-Mediated Substrate Protein
Proteins 61 (2005) 777-794

 

Jing Li, Jun Wang and Wei Wang
Size dependent complexity of sequences in protein families
Europhys. J. B. 47 (2005) 431-436


Jian Zhang, Meng Qin and Wei Wang
Multiple Folding Mechanisms of Protein Ubiquitin
Proteins 59 (2005) 565

 

Sentao Wang and Wei Wang
Transmission of neural activity in a feedforward network
NeuroReport 16 (2005) 807-811

 

Weixin Xu, Jun Wang and Wei Wang,
Protein Folding in Nano-sized Cylinders
Chin. Phys. Lett. 22 (2005) 258-261

 

Bing Xue, Yu Su and Wei Wang
Permeation of particle through a 4-helix-bundle model channel
J. Chem. Phys. 122 (2005) 104703

 

Guanghong Zuo, Jian Zhang, Jun Wang and Wei Wang
Folding behaviour for proteins BBL and E3BD with Go-like models
Chin. Phys.Lett. 22 (2005) 1809-1812

 

Yuebiao Sheng, Jing Li, Baoliang Ma and Wei Wang
Functional structures and folding dynamics of two peptides
Chin. Phys. 14 (2005) 2365-2369

 

Jing Li, Jun Wang and Wei Wang
Scaling behaviour of conserved sites in protein families
Chin. Phys. Lett. 22 (2005) 1274-1277

 

Bing Xue and Wei Wang
Influence of external vibration on tether chain in ligand-receptor binding
J. Chem. Phys. 122 (2005) 194912

 

 

2004

 

Jie Chen, Jun Wang and Wei Wang
Transition states for folding of circular-permuted proteins
Proteins 57 (2004) 153-171


XS Liu, Ke Fan and Wei Wang
The Number of Protein Folds and Their Distribution over Families in Nature
Proteins 54 (2004) 491-499

 

Jing Li, Jun Wang, Jian Zhang and Wei Wang
Thermodynamic stability and kinetic foldability of a lattice protein model
J. Chem. Phys. 120 (2004) 6274-6287

 

Yuguo Yu, Feng Liu, Wei Wang and Tai-sing Lee
Optimal synchrony state fore maximal information transmission
NeuroReport 15 (2004) 1605-1610


Sentao Wang, Feng Liu, Wei Wang and Yuguo Yu
Impact of spatially correlated noise on neuronal firing
Phys. Rev. E 69 (2004) 011909

 

Gaofeng Ji, Bin Xue, and Wei Wang,
Folding of lattice protein model chains with fixed ends
Chin. Phys. 13 (2004) 1574-1581

 

Bin Xue, Jun Wang and Wei Wang
The `folding' behaviors of homopolymers with one end fixed
J. Mod. Phys. B 18 (2004) 2123-2139


Sentao Wang, Jian Xu, Feng Liu and Wei Wang
Improvement of signal transmission through spike-timing-dependent plasticity in neuronal network
Eur. Phys. J. B. 39 (2004) 351-356

 

2003

 

Ke Fan and Wei Wang
What is the minimum number of letters required to fold a protein?
J. Mol. Biol. 328 (2003) 921


Jun Wang and Wei Wang
Folding transition of model protein chains characterized by partition function zeros
J. Chem. Phys. 118 (2003) 2952-2963


Meng Qin, Jun Wang, Y Tang and Wei Wang
Folding behaviors of lattice model proteins with three kinds of contact potentials
Phys. Rev. E 67 (2003) 061905


TP Li, Jun Wang, Ke Fan and Wei Wang
How simple can the proteins be: from the prediction of the classes of protein structures

Mod. Phys. Lett. B 17 (2003) 1-8


Feng Liu, Jianfeng Feng and Wei Wang
Impact of Poisson synaptic inputs with a changing rate on weak-signal processing
Europhys. Lett. 64 (2003) 131-136

 

Yuguo Yu, Feng Liu, and Wei Wang
Synchronized Rhythmic Oscillation in a noisy neural network
J. Phys. Soc. Jpn 72 (2003) 3291.

 

Meng Qin, Jun Wang and Wei Wang
Conservation of hydrophobic and hydrophilic residues in four-helix bundle
Chin. Phys. Lett. 20 (2003) 1883-1886


Bin Xue, Jun Wang and Wei Wang,
Collapse of homopolymer chains with two fixed terminals
J. Chem. Phys. 119 (2003) 7534

 

Tangping Li, Ke Fan, Jun Wang and Wei Wang
Reduction of protein sequence complexity by residue grouping
Protein Eng. 16 (2003) 323


Longhua Hu, Jun Wang and Wei Wang
Folding simulations for a three-helix bundle protein
Inter. J. Mod. Phys. B 17 (2003) 49-54

 

 

2002

 

Jun Wang and Wei Wang
Grouping of residues based on their contact interactions
Phys. Rev. E 65 (2002) 041911

 

Ke Fan, Jun Wang and Wei Wang
Folding of lattice protein chains with modified G(o)over-bar potential
Eur. Phys. B 30 (2002) 381-391

 

Yi Tang and Wei Wang,
Temporal evolution of the bright soliton in an optical fiber
Europhys. Lett. 58 (2002) 188

 

Guoce Zhuang, Jun Wang, Yi Shi Y, and Wei Wang
Phase synchronization and its cluster feature in two-dimensional coupled map lattices
Phys. Rev. E 66 (2002) 046201

 

Meng Qin, Jun Wang, Tanping Li and Wei Wang,
Sequence design and folding dynamics of lattice protein-like model
Inter. J. Mod. Phys. B 16 (2002) 631


Jun Wang, Ke Fan and Wei Wang,
Kinetic transition in model proteins with a denatured native spinodal
Phys. Rev. E 65 (2002) 041925

 

 

2001

 

Ke Fan, Jun Wang and Wei Wang
Modeling two-state cooperativity in protein folding
Phys. Rev. E 64 (2001) 041907

 

Yuguo Yu, Wei Wang, Jiafu Wang and Feng Liu
Resonance-enhanced signal detection and transduction in HH neuronal systems
Phys. Rev. E 63 (2001) 021907

 

Feng Liu, Yuguo Yu and Wei Wang
Signal-to-noise ratio gain in neuronal systems
Phys. Rev. E 63 (2001) 051912


Feng Liu, Bambi Hu and Wei Wang
Effects of correlated and independent noise on signal processing in neuronal systems
Phys. Rev. E 63 (2001) 031907

 

Yuguo Yu, Feng Liu and Wei Wang
Spike timing precision for a neuronal array with periosic signal
Phys. Lett. A 282 (2001) 23-30


Jianyong Wang, Jun Wang and Wei Wang,
Composition preference of amino acds in model-proteins
Chin. Phys. Lett. 18 (2001) 449-451


Feng Liu and Wei Wang
Frequency sensitivity in nervous Systems
Chin. Phys. Lett. 18 (2001) 292-294


Yuguo Yu and Wei Wang,
Generation of spontaneous synchronized rhythm and its role in information processing
Chin. Phys. Lett. 18 (2001) 295-297

 

Yuguo Yu, Feng Liu and Wei Wang,
Frequency sensitivity in HH systems
Biol. Cybern. 84 (2001) 227-235

 

 

2000

 

Jun Wang and Wei Wang
Modeling study on the validity of possibly simplified representation of proteins
Phys. Rev. E 61 (2000) 6981-6


Wei Wang, Zhonghua Liu and Bambi Hu
Phase order in chaotic maps and in coupled map lattice
Phys. Rev. Lett. 84 (2000) 2610-2613

 

Yi Tang and Wei Wang
Perturbation for the kink of the sine-Gordon equation
Phys. Rev. E 62 (2000) 8842-8845


Guoce Zhuang and Wei Wang
Scaling behavior of 1D Pt chains migration on Pt(110)-(1x2) surface
Phys. Lett. A 268 (2000) 413-417

 

Guoce Zhuang and Wei Wang

The atomic moving processes of cluster Ir-18 diffusion on Ir(111)
Inter. J. Mod. Phys. B 14 (2000) 427-434

 

Guoce Zhuang and Wei Wang
Dynamic Scaling of surface growth in the influence of small clusters mobility
Chin. Phys. Lett. 17 (2000) 285-287

 

Guoce Zhuang, Xiaobin Zhu and Wei Wang
Atomic aggregation processes in the early stages of Pt/Pt(111) growth
Chin. Phys. Lett. 17 (2000) 589-591

 

Guoce Zhuang, Jiafu Wang, and Wei Wang
Scaling laws of reversible aggregation in compact cluster system
Inter. J. Mod. Phys. B 14 (2000) 983-991

 

Jun Wang and Wei Wang,
Studies on the simplification of the representation of proteins
Prog. in Phys. 20 (2000) 301-309 (in Chinese)

 

Yuqing Wang, Z.D. Wang and Wei Wang
Dynamical behavior of periodically forced HR neuronal model
J. Phys. Soc Jpn 69 (2000) 276-283

 

Feng Liu, Yuguo Yu and Wei Wang
Information representation and its application to stochastic resonance
J. Phys. Soc Jpn 69 (2000) 4107-4111


Jun Wang and Wei Wang
A computational approach to simplifying the protein folding alphabet
Nature Structural Biology 6 (1999) 1033-1038

 

Zhongwen Xing, Jun Wang and Wei Wang
Effect of interaction energy fluctuation on the folding of a proteinlike model
Phys. Rev. E 58 (1998) 3552-3556


Feng Liu, Jiafu Wang and Wei Wang
Frequency sentitivity in weak signal detection
Phys. Rev. E 59 (1999) 3453-3460

 

Wei Wang , Yuqing Wang and Z.D. Wang
Firing and signal transduction associated with intrinsic oscillation in neuronal systems
Phys. Rev. E 57 (1998) R2527-2530

 

Wei Wang and E. Canessa
Biharmonic pattern selection
Phys. Rev. E 47 (1993) 1243-1248

 

Wei Wang, Guang Chen and Z. D. Wang
40-Hz coherent oscillations in neuronal systems
Phys. Rev. E 56 (1997)3728–3731


Wei Wang, G. Perez and H. A. Cerdeira
Dynamical behavior of the firing in coupled neuronal system
Phys. Rev. E 47 (1993) 2893-2898

 

Wei Wang
Effect of critical field on screened dielectric breakdown growth
Phys. Rev. E 48 (1993) 476-479


H. El-Nashar, Wei Wang and H. A. Cerdeira
Growth morphology for a ballistic deposition model for multiple species
Phys. Rev. E 58 (1998) 4461-4467

 

Wei Wang and H. A. Cerdeira
Kinetic growth of randomlike and ballisticlike deposition models
Phys. Rev. E 47 (1993) 3357-3361

 

Wei Wang and H. A. Cerdeira
Surface kinetic with diffusion of two kinds of particles deposition models
Phys. Rev. E 52 (1995) 6308-6313

 


 

 

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